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Class List

Here are the classes, structs, unions and interfaces with brief descriptions:
AFaIndexerBase
CAlignCompromise
CAlignExact
CAlignFast
CAlignLCS
CAlignNoGaps
CFaData
CFaIndexer1
CFaIndexer2
CFaIndexerCallback
CFaLookup
CFaLookupCallbackBase
CFaLookupPrimerCallback
CFaLookupStsCallback
CFastaMap
CFastaMapData
CFastaMapPrepare
CFastaReader
CHashCoIterator
CHashListIterator
CHashSet
CIndexAssert
CLcsMatrix< T >
CMain
CMatchSts
CMMap
CMmFileSts
CMmSequence
CPcrFastaProcessor
CPcrMachine
CPcrMachineCallback
CPcrMachineCallbackClassic
CPcrMachineCallbackTabular
CPcrMachinePostprocess
CPcrProgressCallback
CReverseConstSeqIterator< T >
CSimpleSTS
CStrRef
CStsFileCallbackDefault
CStsFileHash
CStsHash
IAlign
IFaIndexerCallback
IFaLookupCallback
IFastaReaderCallback
IPcrMachineCallback
IPcrProgressCallback
ISts
IStsFileCallback
SFaMatchBlock
SFile
CFaData::SFileDesc
CMatchSts::SHit
SMatchPos
CPcrMachinePostprocess::SOutput
IPcrMachineCallback::SScore
CFaData::SSeqDesc
SStsPreMatch

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